06 June 2013


Aphaenogaster

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week notes

2013-05-31

Analyses for ‘Genomic estimation of heritability’ revisions.

100 iterations of sampling 50, 100, 150 or 200 accessions and calculating H2gcta for 6 traits. Repeat for either 2500, 25000 or 250000 SNPs. Total of 48 jobs that each take 6-12 hours to run…lots of files to organize.

2013-06-03

Hello June!

Went to UVM East Woods with AN, MH and KP. In 2 hours, found 8 Aphaenogaster colonies, two with queens! Many more other ant species at this site - saw both Lasius and Camponotus sharing nesting logs with Aphaenogaster. KP found 2 more queens filtering colonies in lab.

Planning for Aphaenofest

R

Awesome package with silhouette images of species: phylopic found on Rbloggers. No images of Aphaenogaster.

Example of using slidify for teaching with google forums embedded

2013-06-04

Finishing analyses for heritability paper

Guidelines for making an R reproducible example

2013-06-06

Prepping presentations for Aphaenofest.

Logitech Trackman Marble set up in linux with this guide and Ubuntu info

Beamer slide size 128x96 mm.


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