21 June 2013

Aphaenogaster and Medicago

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Notes for week of June 17

2013-06-17

Finished P-value commentary with Cintia and Cristian! Sent to Ecology for review.

Useful discussion of the bias-variance tradeoff and Random Forests

Github

Working on protocol for using git/github.

Note that git does not show empty directories in git status. Add a README.md file to each directory to get around this.

If you accidentaly add a file that you do not want to track, use git rm --cached FILENAME to remove from version control

To show all branches, including remote use git branch -a

2013-06-18

Edits to Genomic estimation of heritability manuscript.

Finished guide to using git/github and sent to Nick for test.

ggplot2 theme options

2013-06-19

Flu. yuck.

2013-06-20

Organized travel details for the Aphaenogaster collecting trip!

Maps, permits and equipment for Andrew and Mike.

2013-06-21

Edits to ‘Genomic estimation of heritability’ manuscript. Lots of tweaking to figures in ggplot2.

Demonstration of maximum likelihood estimation in R