28 April 2014

population geneticists and GNU parallel

Next post Previous post

Monday notes

is now completed with a single script in 3 hrs 15 min using 407 GB RAM!

- tradeoff between time and memory  
  • Biology seminar
  • Prediction symposium
  • Reading up on random effects ASTER models


Saunders, D., Yoshida, K., Sambles, C., Glover, R., Clavijo, B., Corpas, M., Bunting, D., Dong, S., Clark, M., Swarbreck, D., Ayling, S., Bashton, M., Collin, S., Hosoya, T., Edwards, A., Crossman, L., Etherington, G., Win, J., Cano, L., Studholme, D., Downie, J.A., Caccamo, M., Kamoun, S. & MacLean, D. (2014). Crowdsourced analysis of ash and ash dieback through the Open Ash Dieback project: A year 1 report on datasets and analyses contributed by a self-organising community. bioRxiv. Retrieved April 28, 2014, from http://biorxiv.org/content/early/2014/04/25/004564

Turner, T., Giauque, C.C., Schrider, D.R. & Kern, A.D. (2014). Genome-wide association of foraging behavior in Drosophila melanogaster fails to support large-effect alleles at the foraging gene. bioRxiv. Retrieved April 28, 2014, from http://biorxiv.org/content/early/2014/04/20/004325

Rohlfs, R. & Nielsen, R. (2014). Identifying adaptive and plastic gene expression levels using a unified model for expression variance between and within species. bioRxiv. Retrieved April 28, 2014, from http://www.biorxiv.org/content/early/2014/04/20/004374

Creative Commons Licence
This work is licensed under a Creative Commons Attribution 4.0 International License.